Vibrio lentus strain BSW13

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio lentus strain BSW13 is characterized by a single replicon and is cataloged under the accession number LFQI00000000.1. As a species within the Vibrio genus, it is likely to exhibit traits commonly associated with this group, such as a preference for aquatic environments and potential pathogenicity in certain conditions. The single replicon indicates a streamlined genetic organization, which may influence its adaptability and survival in various ecological niches. The genomic information encapsulated in the accession allows for further exploration and understanding of its genetic makeup, potentially revealing insights into its metabolic capabilities and ecological roles. The ecological significance of Vibrio lentus strain BSW13 may relate to its interactions within marine ecosystems, particularly in nutrient cycling and its relationships with other microorganisms. Understanding its genetic structure could provide clues to its ecological functions and its role in the dynamics of microbial communities in aquatic systems. Overall, the unique traits of this strain underscore its potential importance in microbiological research and ecological studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio lentus
Strainstrain BSW13

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio lentus strain BSW13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio lentus strain BSW13 contig_73, whole genome shotgun

Gene Summary

Adenine Count

1452603 bp

Thymine Count

1437985 bp

Guanine Count

1101565 bp

Cytosine Count

1125319 bp

Genome Length

5117472 bp

Protein-coding Genes

4359 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
general secretion pathway protein gspiACS79_15830P45775Positive3696312 - 369670714357.6
general secretion pathway protein gspjACS79_15835P45776Positive3696694 - 369744628458.8
general secretion pathway protein gspkACS79_15840P45781Positive3697439 - 369848838915.0
general secretion pathway protein gsplACS79_15845P45782Positive3698457 - 369970146690.6
general secretion pathway protein gspmACS79_15850P41851Positive3699722 - 370021018635.8
general secretion pathway protein gspnACS79_15855P45784Positive3700179 - 370099129334.0
3'-5'-bisphosphate nucleotidaseACS79_15860P44332Negative3701116 - 370194330457.1
adp-ribose diphosphataseACS79_15865P45799Negative3701980 - 370253120684.9
amino acid abc transporter substrate-binding proteinACS79_15870Q87TC4Negative3702814 - 370339821006.5
competence protein comfACS79_15875Q8X715Negative3703509 - 370402719724.5

Displaying genes 3131 – 3140 of 4423 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

213 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 213 metabolites

Health Effects

No health effects information available for this bacterium.