Mycobacterium heckeshornense strain RLE

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium heckeshornense strain RLE is characterized by the presence of flagella, which is notable as many mycobacterial species are typically non-motile. The strain has a single replicon, indicating a streamlined genomic structure that may affect its replication and overall cellular processes. The genome of this strain is cataloged under the accession number LFOF00000000.1, providing a unique identifier for researchers interested in studying its genetic material. The presence of flagella could suggest potential for motility, which might influence ecological interactions, such as biofilm formation or colonization abilities in varied environments. Additionally, the single replicon structure may reflect adaptations that enhance its survival and efficiency in specific niches. Understanding the biological and ecological implications of these traits in Mycobacterium heckeshornense strain RLE can lead to insights regarding its role in microbial communities and its potential interactions with other organisms in its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium heckeshornense
Strainstrain RLE

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium heckeshornense strain RLE Mheck_contig000191, whole

Gene Summary

Adenine Count

853815 bp

Thymine Count

854461 bp

Guanine Count

1656725 bp

Cytosine Count

1645172 bp

Genome Length

5010173 bp

Protein-coding Genes

4505 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine synthaseACT16_04250P65847Negative857442 - 85832032256.2
50s ribosomal protein l17ACT16_04255P0A5V5Negative858328 - 85887019296.0
dna-directed rna polymerase subunit alphaACT16_04260A0QKU5Negative858897 - 85994037611.4
30s ribosomal protein s4ACT16_04265P45811Negative860013 - 86061823531.4
30s ribosomal protein s11ACT16_04270A0QKU7Negative860636 - 86104914673.7
30s ribosomal protein s13ACT16_04275A0QKU8Negative861053 - 86142714228.4
50s ribosomal protein l36ACT16_04280A0QKU9Negative861569 - 8616824357.57
translation initiation factor if-1ACT16_04285A0QKV0Negative861744 - 8619658489.46
f420-dependent oxidoreductaseACT16_04290Not AvailablePositive862227 - 86308130531.2
f420-dependent oxidoreductaseACT16_04295Not AvailablePositive863093 - 86395930728.3

Displaying genes 841 – 850 of 4567 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

436 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000198tetracenomycin CC23H20O11Chemical structure of tetracenomycin CNot available
Average472.402Da
Monoisotopic472.100561464Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 436 metabolites

Health Effects

No health effects information available for this bacterium.