Mycolicibacter kumamotonensis strain Roo

Gram-positive

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacter

Description

Mycolicibacter kumamotonensis strain Roo is a Gram-positive bacterium notable for its presence of flagella, which suggests a potential for motility in its environment. The strain has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation. The strain's accession number is LFOE00000000.1, which serves as a unique identifier for genomic data and further analysis. The characteristics of Mycolicibacter kumamotonensis, including its Gram-positive nature and flagellar motility, may play significant roles in its ecological interactions and environmental adaptability. Understanding the traits of Mycolicibacter kumamotonensis strain Roo can provide insights into its biological functions and ecological niche. The presence of flagella may enhance its ability to navigate through various substrates or environments, potentially influencing its survival and interactions with other microorganisms. The implications of these traits can be significant in understanding the microbial dynamics within its habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacter
SpeciesMycolicibacter kumamotonensis
Strainstrain Roo

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycolicibacter kumamotonensis strain Roo Mkuma_contig000276, whole

Gene Summary

Adenine Count

859408 bp

Thymine Count

863391 bp

Guanine Count

1805953 bp

Cytosine Count

1800261 bp

Genome Length

5330450 bp

Protein-coding Genes

4825 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l15ACT18_04150A0PM84Positive847212 - 84765215665.2
hypothetical proteinACT18_04155Not AvailableNegative848546 - 84922322029.9
endopeptidase ivACT18_04165P73689Positive855090 - 85688662230.3
hypothetical proteinACT18_04170Not AvailablePositive856965 - 85727010106.3
beta-lactamaseACT18_04175Q09621Negative857302 - 85853443659.3
phosphodiesteraseACT18_04180Not AvailablePositive858754 - 86019950771.4
sam-dependent methyltransferaseACT18_04185A0QSH5Negative860205 - 86113133395.1
sam-dependent methyltransferaseACT18_04190A0QKY8Negative861131 - 86208734336.9
preprotein translocase subunit secyACT18_04195P0A5Z3Positive862414 - 86374548202.9
adenylate kinaseACT18_04200A3PVF5Positive863742 - 86429320095.9

Displaying genes 781 – 790 of 4910 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

413 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm0000249(2E,4E)-2,4-dichloromuconateC6H2Cl2O4Chemical structure of (2E,4E)-2,4-dichloromuconateNot available
Average208.98Da
Monoisotopic207.9341111Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 413 metabolites

Health Effects

No health effects information available for this bacterium.