Xanthomonas sp. NCPPB 1128 strain NCPPB1128

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas sp. NCPPB 1128 strain NCPPB1128 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This strain is notable for having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The genomic sequence of this strain is accessible under the accession number LFME00000000.1. Xanthomonas species are known to be phytopathogenic, often associated with plant diseases. While specific pathogenicity traits of NCPPB1128 are not detailed in the provided information, the genus Xanthomonas is typically characterized by its ability to infect a wide range of host plants, leading to significant agricultural impacts. The flagella presence in NCPPB1128 could play a critical role in its ecological interactions, allowing for movement toward nutrient sources or away from unfavorable conditions. This motility may enhance its ability to colonize plant surfaces or invade plant tissues, which are key aspects of its ecological niche and potential pathogenic behavior. In summary, Xanthomonas sp. NCPPB 1128 is a motile, rod-shaped bacterium with a single replicon and a sequenced genome. Its traits suggest an ecological adaptation that may be relevant to its role in plant interactions, particularly in agricultural contexts where Xanthomonas species are typically implicated in disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas sp. NCPPB 1128
Strainstrain NCPPB1128

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas sp. NCPPB 1128 strain NCPPB1128
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas sp. NCPPB 1128 strain NCPPB1128 scf_3415_71.contig_1,

Gene Summary

Adenine Count

773320 bp

Thymine Count

766756 bp

Guanine Count

1707343 bp

Cytosine Count

1703006 bp

Genome Length

4950425 bp

Protein-coding Genes

3982 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate epimeraseACP93_12760Not AvailableNegative3011586 - 301244030106.8
hypothetical proteinACP93_12765Not AvailableNegative3012433 - 30126848200.67
membrane proteinACP93_12770Not AvailableNegative3012746 - 301312614539.2
peptidaseACP93_12775Not AvailableNegative3013427 - 301555679957.0
aminotransferaseACP93_12780Not AvailablePositive3015988 - 301719943961.3
membrane proteinACP93_12785Not AvailablePositive3017238 - 301772017351.7
prolyl oligopeptidaseACP93_12790Not AvailableNegative3017857 - 301996277820.1
bleomycin resistance proteinACP93_12795Not AvailableNegative3020116 - 302045111740.1
hypothetical proteinACP93_12800Not AvailableNegative3020462 - 302080912410.1
transmembrane proteinACP93_12805Not AvailableNegative3021050 - 302134611390.2

Displaying genes 2511 – 2520 of 4092 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.