Candidatus Paraburkholderia kirkii strain UZHbot2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Candidatus Paraburkholderia kirkii strain UZHbot2 is a rod-shaped bacterium notable for its single replicon structure, which indicates a streamlined genetic organization. This strain possesses flagella, suggesting motility that may facilitate its interaction with various environments or substrates. The accession number for this strain is LFKV00000000.1, which allows for its identification in genomic databases, aiding in the study of its genetics and potential applications. The presence of flagella may also play a crucial role in its ecological niche, possibly contributing to its ability to colonize specific environments or interact with other microorganisms. Understanding the characteristics of Candidatus Paraburkholderia kirkii strain UZHbot2 can provide insights into its ecological roles and potential applications in biotechnology or bioremediation. The motility conferred by its flagella might enable this strain to navigate through diverse environments, highlighting its adaptability and potential significance in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesCandidatus Paraburkholderia kirkii
Strainstrain UZHbot2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Paraburkholderia kirkii strain UZHbot2 BPUNctg147,

Gene Summary

Adenine Count

705901 bp

Thymine Count

703344 bp

Guanine Count

1256385 bp

Cytosine Count

1249075 bp

Genome Length

3914712 bp

Protein-coding Genes

2325 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
a/g-specific adenine glycosylaseBPUN_1383Not AvailablePositive1131057 - 113211538426.2
hypothetical atp-binding protein upf0042, contains p-loopBPUN_1384Not AvailableNegative1132624 - 113352033172.8
hpr kinase/phosphorylaseBPUN_1385Not AvailableNegative1133623 - 113459135323.9
pts system nitrogen-specific iia component, ptsnBPUN_1386Not AvailableNegative1134778 - 113523316769.3
ribosome hibernation protein yhbhBPUN_1387Not AvailableNegative1135602 - 113591612151.6
rna polymerase sigma-54 factor rponBPUN_1388Not AvailableNegative1136149 - 113766655471.8
lipopolysaccharide abc transporter, atp-binding protein lptbBPUN_1389Not AvailableNegative1137820 - 113858727999.8
lpta, protein essential for lps transport across the periplasmBPUN_1390Not AvailableNegative1138599 - 113927024093.4
putative transmembrane proteinBPUN_1391Not AvailableNegative1139301 - 113990321763.0
3-deoxy-d-manno-octulosonate 8-phosphate phosphataseBPUN_1392Not AvailableNegative1139908 - 114047719762.7

Displaying genes 751 – 760 of 2381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.