Helicobacter pylori strain UM209

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain UM209 is a Gram-negative, microaerophilic bacterium characterized by its spiral shape and presence of flagella, which facilitates its mobility. This strain is predominantly free-living and has a single replicon and double membrane structure. It thrives optimally at 37°C and falls within the mesophilic temperature range. H. pylori UM209 is primarily associated with various hosts, including humans (Homo sapiens), domestic fowl (Gallus gallus), and several other mammals and birds. This bacterium is known for its significant impact on human health, being linked to a range of gastrointestinal diseases. Notably, it is associated with chronic gastric inflammation, peptic ulcer disease, gastric cancer, and several other conditions such as gastritis and mucosa-associated lymphoid tissue (MALT) lymphoma. Its pathogenicity in humans underscores its role in the development of serious health issues like gastric carcinoma and chronic gastritis. The ecological insight into H. pylori UM209 highlights its ability to inhabit the gastrointestinal tract of diverse vertebrate hosts, suggesting a complex interaction with host immune responses and microbiota. This relationship not only impacts individual health but also reflects broader ecological dynamics within host-associated microbial communities, particularly in relation to disease development and chronic conditions linked to H. pylori infection.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain UM209

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain UM209
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain UM209 Contig_20_UM209_(modified), whole

Gene Summary

Adenine Count

475076 bp

Thymine Count

472025 bp

Guanine Count

299118 bp

Cytosine Count

309380 bp

Genome Length

1555658 bp

Protein-coding Genes

1419 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide abc transporter substrate-binding proteinACM24_03640Not AvailableNegative741023 - 74280468560.4
tryptophanyl-trna synthetaseACM24_03645Not AvailableNegative742805 - 74378536909.0
biotin synthaseACM24_03650Not AvailableNegative743857 - 74459428229.0
preprotein translocase subunit secgACM24_03655Not AvailablePositive744718 - 74531121204.6
ribosome recycling factorACM24_03660Not AvailablePositive745311 - 74586820933.2
orotate phosphoribosyltransferaseACM24_03665Not AvailablePositive745872 - 74647721962.8
rdd family proteinACM24_03670Not AvailablePositive746467 - 74693117992.6
nad-dependent protein deacylaseACM24_03675Not AvailablePositive746928 - 74761726012.3
nadh dehydrogenaseACM24_03680Not AvailablePositive747725 - 74812615661.8
nadh dehydrogenaseACM24_03685Not AvailablePositive748126 - 74860517823.9

Displaying genes 691 – 700 of 1461 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total