Helicobacter pylori strain UM209

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain UM209 is a Gram-negative, microaerophilic bacterium characterized by its spiral shape and presence of flagella, which facilitates its mobility. This strain is predominantly free-living and has a single replicon and double membrane structure. It thrives optimally at 37°C and falls within the mesophilic temperature range. H. pylori UM209 is primarily associated with various hosts, including humans (Homo sapiens), domestic fowl (Gallus gallus), and several other mammals and birds. This bacterium is known for its significant impact on human health, being linked to a range of gastrointestinal diseases. Notably, it is associated with chronic gastric inflammation, peptic ulcer disease, gastric cancer, and several other conditions such as gastritis and mucosa-associated lymphoid tissue (MALT) lymphoma. Its pathogenicity in humans underscores its role in the development of serious health issues like gastric carcinoma and chronic gastritis. The ecological insight into H. pylori UM209 highlights its ability to inhabit the gastrointestinal tract of diverse vertebrate hosts, suggesting a complex interaction with host immune responses and microbiota. This relationship not only impacts individual health but also reflects broader ecological dynamics within host-associated microbial communities, particularly in relation to disease development and chronic conditions linked to H. pylori infection.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain UM209

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain UM209
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain UM209 Contig_20_UM209_(modified), whole

Gene Summary

Adenine Count

475076 bp

Thymine Count

472025 bp

Guanine Count

299118 bp

Cytosine Count

309380 bp

Genome Length

1555658 bp

Protein-coding Genes

1419 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar motor switch protein fligACM24_06775Not AvailableNegative1372190 - 137322138328.4
flagellar m-ring protein flifACM24_06780Not AvailableNegative1373239 - 137494263454.8
membrane proteinACM24_06785Not AvailableNegative1374986 - 137564824120.4
ctp synthaseACM24_06790Not AvailablePositive1375899 - 137751560747.7
single-stranded dna exonucleaseACM24_06795Not AvailablePositive1377524 - 137907458475.1
pseudouridine synthaseACM24_06800Not AvailablePositive1379074 - 137995533628.2
membrane proteinACM24_06810Not AvailableNegative1381154 - 138193930076.4
hypothetical proteinACM24_06815Not AvailablePositive1382102 - 138258418707.3
lysozymeACM24_06820Not AvailableNegative1382624 - 138289010335.8
lysozymeACM24_06825Not AvailableNegative1382878 - 138325214529.6

Displaying genes 1301 – 1310 of 1461 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total