Helicobacter pylori strain UM300

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain UM300 is a gram-negative bacterium with a spirilla shape, characterized by its microaerophilic oxygen requirement. This strain exhibits a single-cell arrangement and possesses flagella, contributing to its motility. It is mesophilic, with an optimal growth temperature of 37°C. UM300 has a single replicon and is surrounded by two membranes, which is typical of gram-negative bacteria. UM300 is host-associated, with a diverse range of potential hosts including Homo sapiens, Gallus gallus, various Aves, primates, mammals, amoebas, rodents, and Cricetinae. This bacterium is free-living, yet it establishes a notable biotic relationship with its hosts. The health implications of H. pylori UM300 are significant, as it is associated with a variety of gastrointestinal diseases. These include chronic gastric inflammation, gastritis, peptic ulcer disease, and various forms of gastric cancer, such as gastric adenocarcinoma and mucosa-associated lymphoid tissue (MALT) lymphoma. The strain is also linked to conditions like functional dyspepsia and atrophic gastritis, indicating its role in a spectrum of gastrointestinal maladies. The pathogenicity of H. pylori UM300 in humans highlights its ecological niche as an opportunistic pathogen, exploiting the gastric environment of its hosts to cause chronic diseases. Understanding the mechanisms by which this strain interacts with host tissue could provide insights into the prevention and treatment of gastric-related health issues.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain UM300

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain UM300
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain UM300 Contig_4_UM300, whole genome

Gene Summary

Adenine Count

485607 bp

Thymine Count

481431 bp

Guanine Count

312752 bp

Cytosine Count

311931 bp

Genome Length

1591764 bp

Protein-coding Genes

1422 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sam-dependent methyltransferaseAEY54_01895Not AvailablePositive414615 - 41562538618.0
hypothetical proteinAEY54_01900Not AvailableNegative415596 - 4157937684.39
dihydroneopterin aldolaseAEY54_01905Not AvailablePositive416076 - 41640212775.4
rna methyltransferaseAEY54_01910Not AvailablePositive416381 - 41698322451.6
flagellar basal body-associated protein flilAEY54_01915Not AvailablePositive416992 - 41754320396.9
4'-phosphopantetheinyl transferaseAEY54_01920Not AvailablePositive417550 - 41790612861.9
ligand-gated channelAEY54_01925Not AvailablePositive418101 - 42047989455.4
metalloproteaseAEY54_01930Not AvailableNegative420490 - 42111024085.6
lipooligosaccharide 5g8 epitope biosynthesis-associated protein (lex2b)AEY54_01935Not AvailablePositive421192 - 42203732577.0
3,4-dihydroxy-2-butanone 4-phosphate synthaseAEY54_01940Not AvailablePositive422132 - 42316638879.1

Displaying genes 361 – 370 of 1464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total