Helicobacter pylori strain UM300

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain UM300 is a gram-negative bacterium with a spirilla shape, characterized by its microaerophilic oxygen requirement. This strain exhibits a single-cell arrangement and possesses flagella, contributing to its motility. It is mesophilic, with an optimal growth temperature of 37°C. UM300 has a single replicon and is surrounded by two membranes, which is typical of gram-negative bacteria. UM300 is host-associated, with a diverse range of potential hosts including Homo sapiens, Gallus gallus, various Aves, primates, mammals, amoebas, rodents, and Cricetinae. This bacterium is free-living, yet it establishes a notable biotic relationship with its hosts. The health implications of H. pylori UM300 are significant, as it is associated with a variety of gastrointestinal diseases. These include chronic gastric inflammation, gastritis, peptic ulcer disease, and various forms of gastric cancer, such as gastric adenocarcinoma and mucosa-associated lymphoid tissue (MALT) lymphoma. The strain is also linked to conditions like functional dyspepsia and atrophic gastritis, indicating its role in a spectrum of gastrointestinal maladies. The pathogenicity of H. pylori UM300 in humans highlights its ecological niche as an opportunistic pathogen, exploiting the gastric environment of its hosts to cause chronic diseases. Understanding the mechanisms by which this strain interacts with host tissue could provide insights into the prevention and treatment of gastric-related health issues.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain UM300

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain UM300
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain UM300 Contig_4_UM300, whole genome

Gene Summary

Adenine Count

485607 bp

Thymine Count

481431 bp

Guanine Count

312752 bp

Cytosine Count

311931 bp

Genome Length

1591764 bp

Protein-coding Genes

1422 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna helicaseAEY54_00105Not AvailablePositive26604 - 2807055677.7
competence proteinAEY54_00110Not AvailablePositive28067 - 2938050208.0
prenyltransferaseAEY54_00115Not AvailablePositive29409 - 3029332823.1
hypothetical proteinAEY54_00120Not AvailablePositive30286 - 3078019083.3
membrane proteinAEY54_00125Not AvailablePositive30793 - 3129919759.9
phosphatidylserine decarboxylaseAEY54_00130Not AvailablePositive31293 - 3209630097.4
quinolinate synthetaseAEY54_00135Not AvailablePositive32086 - 3309637691.6
nicotinate-nucleotide pyrophosphorylaseAEY54_00140Not AvailablePositive33096 - 3391730795.6
dna methyltransferaseAEY54_00145Not AvailablePositive33941 - 3642396408.3
3'-5' exonucleaseAEY54_00150Not AvailableNegative36424 - 366709424.1

Displaying genes 21 – 30 of 1464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total