Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 709798 - 709874 | Not Available |
| asparagine synthetase b | SK85_00670 | P22106 | Negative | 710254 - 711918 | 62662.3 |
| ribonucleotide monophosphatase nagd | SK85_00671 | P0AF25 | Negative | 712315 - 713067 | 27164.6 |
| n-acetylglucosamine repressor | SK85_00672 | P0AF22 | Negative | 713115 - 714335 | 44544.0 |
| n-acetylglucosamine-6-phosphate deacetylase | SK85_00673 | P0AF19 | Negative | 714344 - 715492 | 40951.5 |
| glucosamine-6-phosphate deaminase | SK85_00674 | A7ZJ60 | Negative | 715552 - 716352 | 29775.9 |
| pts system n-acetylglucosamine-specific eiicba component | SK85_00675 | P09323 | Positive | 716685 - 718631 | 68383.0 |
| hypothetical protein | SK85_00676 | Not Available | Negative | 718601 - 718723 | 4732.76 |
| glutamine-trna ligase | SK85_00677 | A7ZJ63 | Positive | 718834 - 720498 | 63480.4 |
| chitoporin | SK85_00678 | P75733 | Positive | 721075 - 722481 | 52782.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





