Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endoribonuclease ybey | SK85_00659 | A7ZJ51 | Negative | 704615 - 705082 | 17526.6 |
| phoh-like protein | SK85_00660 | P0A9K5 | Negative | 705079 - 706158 | 40652.9 |
| (dimethylallyl)adenosine trna methylthiotransferase miab | SK85_00661 | A7ZJ54 | Negative | 706272 - 707696 | 53680.1 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | SK85_00662 | P75728 | Positive | 707842 - 709017 | 42957.1 |
| Trna-gln | Not Available | Not Available | Positive | 709171 - 709245 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 709283 - 709357 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 709405 - 709481 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 709497 - 709571 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 709606 - 709680 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 709704 - 709788 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





