Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna ligase | SK85_00649 | P77427 | Positive | 693448 - 694155 | 27023.8 |
| hsc56 co-chaperone for hscc | SK85_00650 | P77359 | Positive | 694152 - 695603 | 55685.0 |
| chaperone hscc | SK85_00651 | P77319 | Negative | 695663 - 697333 | 61989.8 |
| pyrimidine-specific ribonucleoside hydrolase riha | SK85_00652 | C4ZWD8 | Negative | 697417 - 698352 | 33824.9 |
| glutamate/aspartate transport atp-binding protein gltl | SK85_00653 | P0AAG4 | Negative | 698470 - 699195 | 26662.7 |
| glutamate/aspartate transport system permease gltk | SK85_00654 | P0AER7 | Negative | 699195 - 699869 | 24916.2 |
| glutamate/aspartate transport system permease gltj | SK85_00655 | P0AER4 | Negative | 699869 - 700609 | 27504.3 |
| glutamate/aspartate periplasmic-binding protein | SK85_00656 | P37902 | Negative | 700779 - 701687 | 33422.0 |
| apolipoprotein n-acyltransferase | SK85_00657 | P23930 | Negative | 702084 - 703622 | 57069.1 |
| magnesium and cobalt efflux protein corc | SK85_00658 | P0AE80 | Negative | 703647 - 704525 | 33300.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





