Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ribazole phosphatase | SK85_00639 | P52086 | Negative | 683236 - 683847 | 23309.8 |
| nicotinate-nucleotide adenylyltransferase | SK85_00640 | A7ZJ28 | Negative | 683871 - 684512 | 24559.3 |
| dna polymerase iii subunit delta | SK85_00641 | P28630 | Negative | 684514 - 685545 | 38706.0 |
| lps-assembly lipoprotein lpte | SK85_00642 | A7ZJ30 | Negative | 685545 - 686126 | 21357.8 |
| leucine-trna ligase | SK85_00643 | C4ZWC9 | Negative | 686141 - 688723 | 97239.0 |
| hypothetical protein | SK85_00644 | P0AAU1 | Positive | 688958 - 689440 | 18798.2 |
| hypothetical protein | SK85_00645 | P77234 | Negative | 689510 - 690487 | 37032.7 |
| hypothetical protein | SK85_00646 | P77627 | Positive | 690651 - 691358 | 27737.5 |
| chaperone | SK85_00647 | P77381 | Positive | 691355 - 692782 | 55187.3 |
| outer membrane protein | SK85_00648 | P77296 | Negative | 692792 - 693346 | 20885.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





