Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl synthase | SK85_00629 | A7ZJ15 | Negative | 673191 - 674156 | 36073.8 |
| transcriptional regulator | SK85_00630 | P30979 | Negative | 674365 - 675318 | 35962.5 |
| octanoyltransferase | SK85_00631 | A7ZJ18 | Negative | 675577 - 676218 | 23884.0 |
| hypothetical protein | SK85_00632 | A7ZJ19 | Negative | 676319 - 676582 | 9827.92 |
| d-alanyl-d-alanine carboxypeptidase daca | SK85_00633 | P0AEB4 | Negative | 676692 - 677975 | 46937.5 |
| rare lipoprotein a | SK85_00634 | P10100 | Negative | 678042 - 679130 | 37530.1 |
| rod shape-determining protein roda | SK85_00635 | P0ABG8 | Negative | 679141 - 680253 | 40478.6 |
| penicillin-binding protein 2 | SK85_00636 | P0AD67 | Negative | 680256 - 682157 | 70860.6 |
| ribosomal rna large subunit methyltransferase h | SK85_00637 | A7ZJ25 | Negative | 682188 - 682655 | 17342.1 |
| ribosomal silencing factor rsfs | SK85_00638 | P0AAT7 | Negative | 682659 - 682976 | 11582.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





