Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase dpib | SK85_00619 | P77510 | Positive | 664888 - 666546 | 61687.8 |
| transcriptional regulatory protein dpia | SK85_00620 | P0AEF6 | Positive | 666515 - 667195 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | SK85_00621 | P0ABP4 | Negative | 667260 - 668645 | 48415.3 |
| lipid a palmitoyltransferase pagp | SK85_00622 | P37001 | Positive | 669193 - 669552 | 14167.7 |
| transposase insf for insertion sequence is3a | SK85_00623 | Not Available | Negative | 669549 - 670415 | 33542.2 |
| transposase inse for insertion sequence is3a | SK85_00624 | Not Available | Negative | 670412 - 670711 | 11543.8 |
| cold shock-like protein cspe | SK85_00625 | P0A974 | Positive | 671231 - 671440 | 7463.84 |
| protein crcb | SK85_00626 | C4ZWB3 | Negative | 671494 - 671877 | 13778.1 |
| hydrolase ybem | SK85_00627 | P58054 | Positive | 671970 - 672758 | 28683.0 |
| sec-independent protein translocase tate | SK85_00628 | P0A845 | Positive | 672887 - 673090 | 7024.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





