Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_00609 | P0DPN4 | Negative | 655983 - 656072 | 3258.21 |
| regulator for nucleoside diphosphate kinase | SK85_00610 | P0AFW6 | Negative | 656210 - 656620 | 14928.0 |
| ribonuclease i | SK85_00611 | P21338 | Negative | 656850 - 657656 | 29619.1 |
| citrate carrier | SK85_00612 | P0AE75 | Negative | 657770 - 659233 | 53095.7 |
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | SK85_00613 | B7L8J6 | Negative | 659284 - 660162 | 31646.4 |
| apo-citrate lyase phosphoribosyl-dephospho-coa transferase | SK85_00614 | B7L8J7 | Negative | 660137 - 660688 | 20286.5 |
| citrate lyase alpha chain | SK85_00615 | P75726 | Negative | 660692 - 662224 | 55194.0 |
| citrate lyase subunit beta | SK85_00616 | P0A9I2 | Negative | 662235 - 663143 | 33111.6 |
| citrate lyase acyl carrier protein | SK85_00617 | A7ZJ03 | Negative | 663140 - 663436 | 10689.9 |
| [citrate | SK85_00618 | P77390 | Negative | 663451 - 664509 | 40079.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





