Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_00599 | Not Available | Negative | 646666 - 647316 | 25642.7 |
| transposase insd for insertion element is2a/d/f/h/i/k | SK85_00600 | Not Available | Negative | 647301 - 648206 | 34400.0 |
| transposase insc for insertion element is2f | SK85_00601 | Not Available | Negative | 648164 - 648529 | 13452.4 |
| hypothetical protein | SK85_00602 | P77216 | Negative | 648605 - 649222 | 23727.3 |
| transcriptional regulator | SK85_00603 | P77746 | Negative | 649369 - 650271 | 34398.8 |
| thiol:disulfide interchange protein dsbg | SK85_00604 | P77202 | Negative | 650480 - 651226 | 27512.6 |
| alkyl hydroperoxide reductase subunit c | SK85_00605 | P0AE10 | Positive | 651598 - 652161 | 20762.5 |
| alkyl hydroperoxide reductase subunit f | SK85_00606 | P35340 | Positive | 652376 - 653971 | 57405.0 |
| universal stress protein g | SK85_00607 | P39177 | Negative | 654092 - 654520 | 15936.1 |
| oxidoreductase, zn-dependent and nad(p)-binding | SK85_00608 | P77316 | Positive | 654741 - 655979 | 44178.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





