Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine-specific permease | SK85_00569 | P24207 | Positive | 613276 - 614652 | 50680.4 |
| miniconductance mechanosensitive channel ybdg | SK85_00570 | P0AAT4 | Negative | 614733 - 615980 | 46605.5 |
| oxygen-insensitive nad(p)h nitroreductase | SK85_00571 | P38489 | Negative | 616088 - 616741 | 23906.4 |
| hypothetical protein | SK85_00572 | P0AAT3 | Negative | 616835 - 617203 | 14051.1 |
| inner membrane protein | SK85_00573 | P77506 | Negative | 617268 - 617516 | 9404.06 |
| carboxylate-amine ligase ybdk | SK85_00574 | C4ZV25 | Negative | 617582 - 618700 | 41690.7 |
| protein hoke | SK85_00575 | P77091 | Positive | 619054 - 619305 | 9212.59 |
| transposase for insertion sequence element is421 | SK85_00576 | Not Available | Positive | 619382 - 620494 | 40911.1 |
| hypothetical protein | SK85_00577 | Not Available | Positive | 620517 - 620657 | 5345.71 |
| 4'-phosphopantetheinyl transferase entd | SK85_00578 | P19925 | Negative | 620776 - 621519 | 27667.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





