Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional activator for porin biosynthesis protein | SK85_00559 | P10805 | Negative | 597589 - 598350 | 29020.5 |
| hypothetical protein | SK85_00560 | P37325 | Negative | 598533 - 599423 | 33058.6 |
| bacteriophage n4 receptor, outer membrane subunit | SK85_00561 | P31600 | Negative | 599424 - 602396 | 111314.0 |
| bacteriophage n4 adsorption protein b | SK85_00562 | P0AFA6 | Negative | 602383 - 604620 | 85324.3 |
| sensor kinase cuss | SK85_00563 | P77485 | Negative | 604770 - 606212 | 53751.3 |
| transcriptional regulatory protein cusr | SK85_00564 | P0AD00 | Negative | 606202 - 606885 | 25396.1 |
| cation efflux system protein cusc | SK85_00565 | P77211 | Positive | 607042 - 608421 | 50552.8 |
| cation efflux system protein cusf | SK85_00566 | Q8CWA3 | Positive | 608448 - 608780 | 12265.9 |
| cation efflux system protein cusb | SK85_00567 | Q8CWA2 | Positive | 608796 - 610019 | 44413.5 |
| cation efflux system protein cusa | SK85_00568 | P38054 | Positive | 610031 - 613174 | 114730.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





