Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor allr | SK85_00529 | P0ACN6 | Positive | 565739 - 566554 | 29271.4 |
| glyoxylate carboligase | SK85_00530 | P0AEP8 | Positive | 566644 - 568425 | 64677.5 |
| hydroxypyruvate isomerase | SK85_00531 | P30147 | Positive | 568438 - 569214 | 29379.1 |
| 2-hydroxy-3-oxopropionate reductase | SK85_00532 | P77161 | Positive | 569314 - 570192 | 30802.5 |
| allantoin transporter | SK85_00533 | P75712 | Positive | 570361 - 571815 | 52487.3 |
| allantoinase | SK85_00534 | C4ZUW1 | Positive | 571875 - 573236 | 49604.4 |
| uracil/xanthine transporter | SK85_00535 | P77328 | Positive | 573293 - 574594 | 47242.2 |
| glycerate kinase | SK85_00536 | P77364 | Positive | 574616 - 575761 | 38736.9 |
| ureidoglycine aminohydrolase | SK85_00537 | P75713 | Negative | 575989 - 576774 | 28732.1 |
| allantoate amidohydrolase | SK85_00538 | P77425 | Negative | 576785 - 578020 | 45696.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





