Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SK85_00519 | P0A9T9 | Positive | 552461 - 553147 | 24534.5 |
| abc transporter permease | SK85_00520 | P77504 | Positive | 553144 - 555558 | 89351.5 |
| protein rhsd | SK85_00521 | Not Available | Positive | 555989 - 560269 | 159791.0 |
| hypothetical protein | SK85_00522 | P33668 | Positive | 560309 - 560677 | 14153.2 |
| protein rhsd | SK85_00523 | P77759 | Positive | 560677 - 561387 | 26961.6 |
| hypothetical protein | SK85_00524 | P33669 | Positive | 561368 - 561628 | 10052.4 |
| transcriptional regulator | SK85_00525 | Q7DC27 | Negative | 562373 - 562744 | 13916.6 |
| trna 2-selenouridine synthase | SK85_00526 | C4ZUV3 | Negative | 562860 - 563954 | 41113.2 |
| hth-type transcriptional activator alls | SK85_00527 | P0ACR1 | Negative | 564023 - 564949 | 34513.6 |
| ureidoglycolate lyase | SK85_00528 | P63486 | Positive | 565179 - 565661 | 18223.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





