Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaminase 1 | SK85_00509 | P77454 | Positive | 544369 - 545301 | 32905.2 |
| inner membrane transporter ybat | SK85_00510 | P77400 | Positive | 545304 - 546596 | 45661.5 |
| hth-type transcriptional regulator cuer | SK85_00511 | P0A9G4 | Positive | 546721 - 547128 | 15236.0 |
| inner membrane protein ybbj | SK85_00512 | P0AAS3 | Negative | 547129 - 547584 | 16808.6 |
| protein qmca | SK85_00513 | P0AA55 | Negative | 547584 - 548501 | 33745.1 |
| abc transporter atp-binding protein | SK85_00514 | P77279 | Positive | 548647 - 549324 | 25383.5 |
| abc transporter permease | SK85_00515 | P77307 | Positive | 549311 - 550090 | 28166.5 |
| thioredoxin | SK85_00516 | P77395 | Negative | 550153 - 551007 | 31792.9 |
| oxidoreductase with nad(p)-binding rossmann-fold | SK85_00517 | P0AFP5 | Negative | 551068 - 551838 | 28001.2 |
| acyl-coa thioesterase i | SK85_00518 | P0ADA2 | Negative | 551867 - 552460 | 22163.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





