Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrochelatase | SK85_00499 | C4ZUS9 | Positive | 530784 - 531746 | 35886.4 |
| acetyl esterase | SK85_00500 | B7NIF4 | Negative | 531743 - 532702 | 36036.0 |
| inosine-guanosine kinase | SK85_00501 | P0AEW8 | Positive | 532854 - 534158 | 48407.4 |
| inner membrane protein ybal | SK85_00502 | P39830 | Negative | 534291 - 535967 | 59427.3 |
| fosmidomycin resistance protein | SK85_00503 | P52067 | Negative | 536205 - 537425 | 43308.2 |
| protein usha | SK85_00504 | P07024 | Positive | 537643 - 539295 | 60790.4 |
| cys-trna(pro)/cys-trna(cys) deacylase ybak | SK85_00505 | P0AAR3 | Negative | 539332 - 539811 | 17093.9 |
| ligase | SK85_00506 | P77301 | Negative | 540015 - 540809 | 29904.3 |
| higa family addiction module antidote protein | SK85_00507 | P0A9T7 | Positive | 540862 - 541287 | 16243.5 |
| copper-exporting p-type atpase a | SK85_00508 | Q59385 | Negative | 541603 - 544107 | 87878.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





