Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive channel msck | SK85_00489 | P77338 | Positive | 519265 - 522627 | 127223.0 |
| hypothetical protein | SK85_00490 | P45807 | Negative | 522839 - 523000 | 6025.2 |
| primosomal replication protein n'' | SK85_00491 | P23862 | Negative | 523014 - 523541 | 20376.5 |
| inner membrane protein yban | SK85_00492 | P0AAR6 | Positive | 523611 - 523988 | 14771.0 |
| adenine phosphoribosyltransferase | SK85_00493 | A7ZIM8 | Positive | 524141 - 524692 | 19860.1 |
| dna polymerase iii subunit tau | SK85_00494 | P06710 | Positive | 524821 - 526752 | 71153.9 |
| nucleoid-associated protein ybab | SK85_00495 | B7UKF1 | Positive | 526805 - 527134 | 12015.6 |
| recombination protein recr | SK85_00496 | A7ZIN2 | Positive | 527134 - 527739 | 21964.3 |
| chaperone htpg | SK85_00497 | P0A6Z5 | Positive | 527849 - 529723 | 71426.3 |
| adenylate kinase | SK85_00498 | A7ZIN4 | Positive | 529904 - 530548 | 23587.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





