Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lysb family phage lysis regulatory protein | SK85_00876 | Not Available | Positive | 921380 - 921808 | 15760.7 |
| Putative phage tail protein | SK85_00877 | P36933 | Positive | 921904 - 922335 | 16101.1 |
| Virion morphogenesis protein | SK85_00878 | P36934 | Positive | 922328 - 922774 | 17138.9 |
| hypothetical protein | SK85_00879 | Not Available | Negative | 922850 - 924625 | 67698.0 |
| Putative phage baseplate assembly protein | SK85_00880 | P31340 | Positive | 924904 - 925482 | 20890.7 |
| Attr | Not Available | Not Available | Positive | 924977 - 924990 | Not Available |
| Phage baseplate assembly protein | SK85_00881 | P51768 | Positive | 925479 - 925838 | 12976.4 |
| Baseplate assembly protein | SK85_00882 | P51767 | Positive | 925825 - 926733 | 32540.6 |
| Tail protein i | SK85_00883 | P26701 | Positive | 926726 - 927331 | 22544.8 |
| Variable tail fiber protein | SK85_00884 | P26700 | Positive | 927328 - 928737 | 49242.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





