Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | SK85_00479 | P0AFP2 | Negative | 508711 - 509022 | 11488.8 |
| hypothetical protein | SK85_00480 | P0AAQ8 | Positive | 509401 - 509754 | 13318.9 |
| inner membrane protein | SK85_00481 | P77473 | Negative | 509796 - 511346 | 58723.8 |
| inner membrane protein ylac | SK85_00482 | P0AAS1 | Negative | 511510 - 511980 | 18268.2 |
| maltose o-acetyltransferase | SK85_00483 | P77791 | Negative | 512096 - 512647 | 20097.2 |
| hemolysin expression-modulating protein hha | SK85_00484 | P0ACE5 | Negative | 512819 - 513037 | 8628.46 |
| hha toxicity modulator tomb | SK85_00485 | P0AAR2 | Negative | 513063 - 513437 | 14558.1 |
| multidrug efflux pump subunit acrb | SK85_00486 | P31224 | Negative | 513983 - 517132 | 113580.0 |
| multidrug efflux pump subunit acra | SK85_00487 | P0AE07 | Negative | 517155 - 518348 | 42199.1 |
| hth-type transcriptional regulator acrr | SK85_00488 | P0ACT0 | Positive | 518490 - 519137 | 24768.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





