Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-cyano-7-deazaguanine synthase | SK85_00469 | C4ZTK1 | Negative | 497581 - 498276 | 25515.6 |
| abc transporter periplasmic-binding protein | SK85_00470 | P46890 | Negative | 498341 - 500041 | 64995.2 |
| hmp-pp phosphatase | SK85_00471 | C4ZTK3 | Positive | 500141 - 500959 | 30372.7 |
| transcriptional regulator | SK85_00472 | P0ACJ7 | Positive | 501112 - 501570 | 17438.4 |
| multidrug resistance-like atp-binding protein mdla | SK85_00473 | P77265 | Positive | 501600 - 503372 | 66021.3 |
| multidrug resistance-like atp-binding protein mdlb | SK85_00474 | P0AAG7 | Positive | 503365 - 505146 | 65226.5 |
| nitrogen regulatory protein p-ii 2 | SK85_00475 | P0AC57 | Positive | 505327 - 505665 | 12259.9 |
| ammonia channel | SK85_00476 | P69680 | Positive | 505695 - 506981 | 44517.4 |
| acyl-coa thioesterase 2 | SK85_00477 | P0AGG3 | Negative | 507030 - 507890 | 31968.1 |
| outer membrane lipoprotein | SK85_00478 | P77717 | Positive | 508108 - 508680 | 19442.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





