Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | SK85_00459 | P0ADA6 | Negative | 486318 - 486896 | 20951.3 |
| protein bola | SK85_00460 | P0ABE3 | Positive | 487204 - 487518 | 11863.1 |
| trigger factor | SK85_00461 | B7UJQ9 | Positive | 487862 - 489160 | 48195.4 |
| atp-dependent clp protease proteolytic subunit | SK85_00462 | A7ZIJ5 | Positive | 489406 - 490029 | 23188.1 |
| atp-dependent clp protease atp-binding subunit clpx | SK85_00463 | A7ZIJ6 | Positive | 490155 - 491429 | 46358.7 |
| lon protease | SK85_00464 | P0A9M1 | Positive | 491617 - 493971 | 87443.4 |
| dna-binding protein hu-beta | SK85_00465 | P0ACF6 | Positive | 494180 - 494452 | 9226.08 |
| peptidyl-prolyl cis-trans isomerase d | SK85_00466 | P0ADY2 | Positive | 494644 - 496515 | 68153.7 |
| competence protein comea | SK85_00467 | P0AAR8 | Positive | 496666 - 497037 | 12704.4 |
| long-chain acyl-coa thioesterase fadm | SK85_00468 | P77712 | Positive | 497131 - 497529 | 15089.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





