Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin biosynthesis protein ribd | SK85_00439 | P25539 | Positive | 466184 - 467287 | 40374.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | SK85_00440 | A8AK39 | Positive | 467376 - 467846 | 16157.4 |
| transcription antitermination factor nusb | SK85_00441 | A7ZIG9 | Positive | 467866 - 468285 | 15689.9 |
| thiamine-monophosphate kinase | SK85_00442 | P0AGG1 | Positive | 468363 - 469340 | 35072.8 |
| phosphatidylglycerophosphatase a | SK85_00443 | P18200 | Positive | 469318 - 469836 | 19419.2 |
| 2-carboxybenzaldehyde reductase | SK85_00444 | P77735 | Negative | 469890 - 470864 | 36422.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SK85_00445 | C4ZTH7 | Negative | 471044 - 472906 | 67620.9 |
| farnesyl diphosphate synthase | SK85_00446 | P22939 | Negative | 472931 - 473830 | 32161.5 |
| exodeoxyribonuclease 7 small subunit | SK85_00447 | A7ZIH5 | Negative | 473830 - 474072 | 8952.42 |
| trna sulfurtransferase | SK85_00448 | C4ZTI0 | Positive | 474278 - 475726 | 54976.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





