Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination-associated protein rdgc | SK85_00419 | A7ZIE2 | Negative | 441837 - 442814 | 36569.6 |
| fructokinase | SK85_00420 | P23917 | Positive | 442873 - 443781 | 32501.7 |
| protein araj | SK85_00421 | P23910 | Negative | 444026 - 445294 | 44640.5 |
| nuclease sbccd subunit c | SK85_00422 | P13458 | Negative | 445336 - 448482 | 118728.0 |
| nuclease sbccd subunit d | SK85_00423 | P0AG77 | Negative | 448479 - 449681 | 44716.1 |
| phosphate regulon transcriptional regulatory protein phob | SK85_00424 | P0AFJ6 | Positive | 449871 - 450560 | 26435.0 |
| phosphate regulon sensor protein phor | SK85_00425 | P08400 | Positive | 450618 - 451913 | 49632.4 |
| branched-chain amino acid transport system 2 carrier protein | SK85_00426 | P0ADA0 | Positive | 452320 - 453639 | 46211.5 |
| proline-specific permease proy | SK85_00427 | P0AAE4 | Positive | 453715 - 455088 | 50218.8 |
| maltodextrin glucosidase | SK85_00428 | P21517 | Positive | 455244 - 457061 | 69175.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





