Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | SK85_00409 | Not Available | Positive | 434477 - 435448 | 33729.9 |
| alkaline phosphatase | SK85_00410 | P00634 | Positive | 435445 - 435891 | 15757.5 |
| phosphate starvation-inducible protein psif | SK85_00411 | P0AFM5 | Positive | 436010 - 436330 | 11687.2 |
| diguanylate cyclase | SK85_00412 | P0AAP2 | Positive | 436432 - 437547 | 41539.9 |
| pyrroline-5-carboxylate reductase | SK85_00413 | P0A9L8 | Negative | 437564 - 438373 | 28146.6 |
| hypothetical protein | SK85_00414 | A7ZID6 | Positive | 438493 - 438951 | 16970.4 |
| shikimate kinase 2 | SK85_00415 | A7ZID7 | Positive | 439134 - 439658 | 19151.9 |
| hypothetical protein | SK85_00416 | P0AAN7 | Positive | 439708 - 439899 | 7281.55 |
| protein arom | SK85_00417 | P0AE28 | Positive | 440157 - 440834 | 24918.5 |
| hypothetical protein | SK85_00418 | A7ZIE0 | Positive | 440906 - 441190 | 10234.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





