Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| structural protein | SK85_00399 | P77199 | Positive | 424242 - 427148 | 104730.0 |
| transcriptional regulator | SK85_00400 | P0AAP6 | Positive | 427236 - 427859 | 23957.1 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | SK85_00401 | P0AD71 | Negative | 427860 - 429017 | 41851.5 |
| hypothetical protein | SK85_00402 | Not Available | Negative | 429063 - 429164 | 3919.98 |
| peptide antibiotic transporter sbma | SK85_00403 | P0AFY7 | Positive | 429369 - 430589 | 46461.9 |
| transcriptional regulator | SK85_00404 | P77562 | Positive | 430602 - 431696 | 40416.5 |
| inner membrane protein yaiy | SK85_00405 | P0AAP9 | Negative | 431755 - 432063 | 11425.2 |
| inner membrane protein | SK85_00406 | P0AAQ1 | Positive | 432323 - 432535 | 8097.92 |
| d-alanine-d-alanine ligase a | SK85_00407 | P0A6J9 | Negative | 432559 - 433653 | 39318.0 |
| anti-adapter protein irap | SK85_00408 | A7ZID1 | Positive | 434116 - 434376 | 9938.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





