Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine deaminase | SK85_00369 | P25524 | Positive | 392065 - 393348 | 47593.8 |
| hth-type transcriptional regulator cynr | SK85_00370 | P27111 | Negative | 393485 - 394384 | 32962.8 |
| carbonic anhydrase 1 | SK85_00371 | P0ABF0 | Positive | 394493 - 395152 | 23765.6 |
| cyanate hydratase | SK85_00372 | B1XBI8 | Positive | 395183 - 395653 | 17049.8 |
| cyanate transporter cynx | SK85_00373 | P17583 | Positive | 395659 - 396840 | 42507.6 |
| galactoside o-acetyltransferase | SK85_00374 | P07464 | Negative | 396943 - 397548 | 22555.0 |
| lactose permease | SK85_00375 | Not Available | Negative | 397620 - 398201 | 21222.4 |
| lactose permease | SK85_00376 | P02920 | Negative | 398270 - 398809 | 20727.9 |
| beta-galactosidase | SK85_00377 | P00722 | Negative | 398861 - 401935 | 116489.0 |
| lactose operon repressor | SK85_00378 | P03023 | Negative | 402058 - 403149 | 38904.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





