Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_00359 | P75692 | Positive | 381370 - 381615 | 8891.02 |
| neutral amino-acid efflux system protein | SK85_00360 | P75693 | Negative | 381632 - 382264 | 23222.8 |
| hypothetical protein | SK85_00361 | P75694 | Positive | 382450 - 382725 | 9895.93 |
| propionate catabolism operon regulatory protein | SK85_00362 | P77743 | Negative | 382823 - 384409 | 58652.9 |
| methylisocitrate lyase | SK85_00363 | P77541 | Positive | 384648 - 385538 | 32136.5 |
| ribonucleoside-diphosphate reductase subunit beta | SK85_00364 | Not Available | Negative | 385359 - 385798 | 16643.2 |
| 2-methylcitrate synthase | SK85_00365 | P31660 | Positive | 386000 - 387169 | 43104.6 |
| 2-methylcitrate dehydratase | SK85_00366 | P77243 | Positive | 387203 - 388654 | 53954.7 |
| propionate-coa ligase | SK85_00367 | P77495 | Positive | 388694 - 390580 | 69381.8 |
| cytosine permease | SK85_00368 | P0AA83 | Positive | 390816 - 392075 | 43652.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





