Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SK85_00349 | P77219 | Negative | 370582 - 371079 | 17312.0 |
| transcriptional regulator with ankyrin domain-containing protein | SK85_00350 | P77736 | Positive | 371337 - 371942 | 21688.3 |
| hypothetical protein | SK85_00351 | P77297 | Positive | 371982 - 372845 | 32267.6 |
| acyl-coa synthetase | SK85_00352 | P77187 | Positive | 372835 - 374382 | 55584.1 |
| hypothetical protein | SK85_00353 | P77221 | Positive | 374382 - 375800 | 50377.0 |
| carbamate kinase-like protein yahi | SK85_00354 | P77624 | Positive | 376131 - 377081 | 33888.9 |
| deaminase with metallo-dependent hydrolase domain-containing protein | SK85_00355 | P77554 | Positive | 377091 - 378473 | 50551.7 |
| aldehyde reductase yahk | SK85_00356 | P75691 | Positive | 378850 - 379899 | 37980.6 |
| hypothetical protein | SK85_00357 | P77393 | Positive | 380142 - 380957 | 31745.3 |
| Trna-pseudo | Not Available | Not Available | Positive | 381300 - 381380 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





