Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SK85_00339 | Not Available | Negative | 359417 - 359980 | 21073.2 |
| transposase insd for insertion element is2a/d/f/h/i/k | SK85_00340 | Not Available | Negative | 359965 - 360870 | 34400.0 |
| transposase insc for insertion element is2 on f plasmid | SK85_00341 | Not Available | Negative | 360828 - 361193 | 13452.4 |
| hypothetical protein | SK85_00342 | P77180 | Negative | 361269 - 361421 | 6043.93 |
| oxygen-dependent choline dehydrogenase | SK85_00343 | B1XE52 | Negative | 361634 - 363304 | 61881.1 |
| nad/nadp-dependent betaine aldehyde dehydrogenase | SK85_00344 | B1XET7 | Negative | 363318 - 364790 | 52914.1 |
| hth-type transcriptional regulator beti | SK85_00345 | B1XET8 | Negative | 364804 - 365391 | 21816.3 |
| high-affinity choline transporter | SK85_00346 | P0ABD0 | Positive | 365520 - 367553 | 75846.5 |
| cyclic di-gmp phosphodiesterase yaha | SK85_00347 | P21514 | Positive | 368428 - 369516 | 40727.2 |
| transcriptional regulator | SK85_00348 | P77700 | Negative | 369558 - 370490 | 34798.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





