Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase accessory factor | SK85_00318 | P77183 | Positive | 339252 - 340208 | 34929.9 |
| transcriptional regulator | SK85_00319 | P75684 | Positive | 340187 - 340597 | 15464.8 |
| hypothetical protein | SK85_00320 | Not Available | Negative | 340859 - 340987 | 4763.71 |
| inner membrane protein ykgb | SK85_00333 | P75685 | Negative | 352447 - 353040 | 21900.7 |
| oxidoreductase with fad/nad(p)-binding domain and dimerization domain-containing protein | SK85_00334 | P77212 | Negative | 353397 - 354722 | 48263.2 |
| transcriptional regulator | SK85_00335 | P77379 | Positive | 354948 - 355802 | 31476.2 |
| oxidoreductase | SK85_00336 | P77252 | Positive | 356329 - 357048 | 26005.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 356671 - 356785 | Not Available |
| iron-sulfur cluster-binding protein | SK85_00337 | P77536 | Positive | 357059 - 358486 | 53055.0 |
| hypothetical protein | SK85_00338 | P77433 | Positive | 358479 - 359174 | 25214.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





