Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator mata | SK85_00308 | B1XE36 | Positive | 326690 - 327232 | 21233.7 |
| fimbrillin protein matb | SK85_00309 | P0AAA4 | Positive | 327307 - 327894 | 20112.5 |
| hypothetical protein | SK85_00310 | A7ZI26 | Positive | 327952 - 328620 | 24518.3 |
| aromatic compound dioxygenase | SK85_00311 | P77802 | Positive | 328646 - 331171 | 91233.7 |
| receptor | SK85_00312 | P77694 | Positive | 331161 - 332804 | 60012.2 |
| hypothetical protein | SK85_00313 | P77263 | Positive | 332773 - 333483 | 26629.7 |
| inner membrane protein yagu | SK85_00314 | P0AAA2 | Negative | 334373 - 334987 | 22968.1 |
| xanthine dehydrogenase, 2fe-2s subunit | SK85_00315 | P77165 | Positive | 335405 - 336094 | 24344.1 |
| oxidoreductase with fad-binding domain-containing protein | SK85_00316 | P77324 | Positive | 336091 - 337047 | 33859.8 |
| oxidoreductase with molybdenum-binding domain-containing protein | SK85_00317 | P77489 | Positive | 337044 - 339242 | 78092.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





