Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vertebrate c-lysozyme inhibitor | SK85_00251 | P0AD60 | Positive | 280143 - 280616 | 16873.2 |
| acyl-coenzyme a dehydrogenase | SK85_00252 | Q47146 | Negative | 280659 - 283103 | 89229.7 |
| phosphoheptose isomerase | SK85_00253 | A7ZHY1 | Positive | 283343 - 283921 | 20816.0 |
| glutamine amidotransferase | SK85_00254 | Q47147 | Positive | 284127 - 284894 | 28637.2 |
| hypothetical protein | SK85_00255 | P0AAA0 | Negative | 284865 - 285605 | 28022.8 |
| mrna interferase yafq | SK85_00256 | Q47149 | Negative | 285761 - 286039 | 10847.2 |
| antitoxin dinj | SK85_00257 | Q47150 | Negative | 286042 - 286302 | 9406.33 |
| lipoprotein and c40 family peptidase | SK85_00258 | Q47151 | Positive | 286557 - 287261 | 27261.4 |
| transposase | SK85_00259 | Q47152 | Positive | 287437 - 287934 | 20042.8 |
| flagella biosynthesis protein flha | SK85_00260 | Q47153 | Negative | 288158 - 289897 | 63157.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





