Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SK85_00856 | P15236 | Positive | 906476 - 906676 | 7717.47 |
| Hypothetical protein | SK85_00857 | P62535 | Positive | 906640 - 906981 | 12832.6 |
| Hypothetical protein | SK85_00858 | Not Available | Positive | 907049 - 907282 | 8536.14 |
| Zinc-finger containing protein | SK85_00859 | P41059 | Positive | 907282 - 907509 | 8307.18 |
| Dna adenine methyltransferase | SK85_00860 | P21311 | Positive | 907506 - 908363 | 32151.9 |
| Replication endonuclease | SK85_00861 | Q323T3 | Positive | 908360 - 910774 | 92473.5 |
| Hypothetical protein | SK85_00862 | Not Available | Positive | 910928 - 911116 | 7299.72 |
| Dna damage inducible protein | SK85_00863 | P21320 | Positive | 911127 - 911360 | 9160.16 |
| Hypothetical protein | SK85_00864 | Not Available | Positive | 911474 - 912151 | 23858.2 |
| Sefir domain protein | SK85_00865 | Not Available | Positive | 912555 - 913994 | 54947.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





