Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| evpb/family type vi secretion protein | SK85_00241 | Q9I748 | Negative | 267071 - 268546 | 55733.1 |
| hypothetical protein | SK85_00242 | Not Available | Negative | 268597 - 268821 | 8411.01 |
| type vi secretion protein | SK85_00243 | Not Available | Negative | 268856 - 269356 | 18052.4 |
| type vi secretion system secreted protein hcp | SK85_00244 | Q9HI36 | Positive | 270051 - 270569 | 19256.8 |
| hypothetical protein | SK85_00245 | Not Available | Positive | 270779 - 272920 | 79688.9 |
| protein rhsd | SK85_00246 | Not Available | Positive | 272996 - 277240 | 158939.0 |
| hypothetical protein | SK85_00247 | Not Available | Positive | 277218 - 277451 | 8329.43 |
| hypothetical protein | SK85_00248 | Not Available | Positive | 277435 - 277611 | 6941.25 |
| h repeat-associated protein yhhi | SK85_00249 | Not Available | Positive | 278042 - 279178 | 43205.0 |
| hydrolase yafv | SK85_00250 | Q47679 | Negative | 279219 - 279989 | 28926.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





