Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_00211 | A7ZHU5 | Positive | 238295 - 239074 | 29128.3 |
| s-adenosyl-l-methionine-dependent methyltransferase | SK85_00212 | P30866 | Positive | 239078 - 239701 | 22992.4 |
| membrane-bound lytic murein transglycosylase d | SK85_00213 | P0AEZ8 | Negative | 239749 - 240969 | 44680.6 |
| hydroxyacylglutathione hydrolase | SK85_00214 | P0AC85 | Negative | 241179 - 241934 | 28435.9 |
| s-adenosyl-l-methionine-dependent methyltransferase | SK85_00215 | P75672 | Positive | 241968 - 242690 | 27245.7 |
| ribonuclease h | SK85_00216 | A7ZHV1 | Negative | 242687 - 243154 | 17597.9 |
| dna polymerase iii subunit epsilon | SK85_00217 | P03007 | Positive | 243210 - 243950 | 27403.9 |
| Trna-asp | Not Available | Not Available | Positive | 244083 - 244159 | Not Available |
| aminopeptidase | SK85_00219 | P77339 | Positive | 244487 - 245272 | 29607.2 |
| hypothetical protein | SK85_00220 | A5A605 | Negative | 245409 - 245888 | 18118.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





