Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | SK85_00180 | A7ZHS0 | Positive | 206814 - 207269 | 17034.0 |
| acyl-[acyl-carrier-protein]-udp-n- acetylglucosamine o-acyltransferase | SK85_00181 | A7ZHS1 | Positive | 207273 - 208061 | 28081.7 |
| lipid-a-disaccharide synthase | SK85_00182 | A7ZHS2 | Positive | 208061 - 209209 | 42398.9 |
| ribonuclease hii | SK85_00183 | A7ZHS3 | Positive | 209206 - 209802 | 21527.3 |
| dna polymerase iii subunit alpha | SK85_00184 | P10443 | Positive | 209839 - 213321 | 129912.0 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit alpha | SK85_00185 | A7ZHS5 | Positive | 213334 - 214293 | 35243.6 |
| lysine decarboxylase, constitutive | SK85_00186 | P52095 | Positive | 214392 - 216533 | 80594.9 |
| glyoxylase i family protein | SK85_00187 | P52096 | Positive | 216590 - 216979 | 14737.4 |
| trna(ile)-lysidine synthase | SK85_00188 | P52097 | Positive | 217044 - 218342 | 48206.9 |
| protein rof | SK85_00189 | P0AFW8 | Negative | 218391 - 218651 | 9710.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





