Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_05044 | P13659 | Negative | 5196698 - 5197228 | 20563.8 |
| mobilization protein mbec | SK85_05045 | P13657 | Negative | 5197906 - 5198262 | 13186.3 |
| regulatory protein rop | SK85_05046 | P03051 | Positive | 5198294 - 5198485 | 7241.44 |
| hypothetical protein | SK85_05047 | Not Available | Negative | 5199127 - 5199195 | 2817.57 |
| hypothetical protein | SK85_05048 | P14492 | Positive | 5199372 - 5200298 | 36370.5 |
| hypothetical protein | SK85_05049 | Not Available | Positive | 5200301 - 5200834 | 19826.8 |
| hypothetical protein | SK85_05050 | P0C265 | Negative | 5200900 - 5201109 | 8127.76 |
| hypothetical protein | SK85_05051 | Not Available | Positive | 5201324 - 5201491 | 6541.3 |
| hypothetical protein | SK85_05052 | Not Available | Positive | 5202846 - 5203760 | 34633.2 |
| hypothetical protein | SK85_05053 | Not Available | Negative | 5203964 - 5204362 | 15333.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





