Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SK85_05024 | Not Available | Negative | 5173709 - 5174596 | 33679.1 |
| transposase | SK85_05025 | Not Available | Negative | 5174596 - 5174922 | 12644.0 |
| hypothetical protein | SK85_05026 | Not Available | Negative | 5175235 - 5175816 | 22219.2 |
| serine protease sat autotransporter | SK85_05027 | Q8FDW4 | Negative | 5175863 - 5179750 | 139983.0 |
| transposase | SK85_05028 | P0A1V2 | Positive | 5180536 - 5180862 | 12644.0 |
| transposase | SK85_05029 | Not Available | Positive | 5180862 - 5181749 | 33679.1 |
| minor fimbrial protein prsf | SK85_05030 | Not Available | Positive | 5182259 - 5182762 | 17741.3 |
| hypothetical protein | SK85_05031 | P13720 | Positive | 5182806 - 5183813 | 37702.2 |
| transposase | SK85_05032 | Not Available | Positive | 5184018 - 5184269 | 9743.03 |
| regulator papx protein | SK85_05033 | P62089 | Positive | 5185335 - 5185835 | 19500.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





