Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_05014 | Not Available | Positive | 5160089 - 5161954 | 71235.8 |
| hypothetical protein | SK85_05015 | Q9RNC7 | Positive | 5162011 - 5163075 | 40377.6 |
| hypothetical protein | SK85_05016 | Not Available | Positive | 5163053 - 5163124 | 2813.57 |
| hypothetical protein | SK85_05017 | Not Available | Positive | 5163305 - 5164231 | 35723.5 |
| hypothetical protein | SK85_05018 | Not Available | Negative | 5164181 - 5165374 | 41327.3 |
| n(2)-citryl-n(6)-acetyl-n(6)-hydroxylysine synthase | SK85_05019 | Q47316 | Positive | 5165510 - 5167234 | 65021.6 |
| n(6)-hydroxylysine o-acetyltransferase | SK85_05020 | Q47317 | Positive | 5167235 - 5168182 | 37234.2 |
| aerobactin synthase | SK85_05021 | Q47318 | Positive | 5168182 - 5169924 | 66694.4 |
| l-lysine n6-monooxygenase | SK85_05022 | P11295 | Positive | 5169921 - 5171258 | 50938.7 |
| ferric aerobactin receptor | SK85_05023 | Q6U607 | Positive | 5171261 - 5173459 | 81009.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





