Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_05004 | Not Available | Positive | 5153540 - 5154031 | 18262.0 |
| hypothetical protein | SK85_05005 | Not Available | Negative | 5154089 - 5154388 | 10932.4 |
| hypothetical protein | SK85_05006 | O53468 | Negative | 5154385 - 5154735 | 13771.5 |
| hypothetical protein | SK85_05007 | Not Available | Positive | 5155093 - 5155596 | 19905.9 |
| hypothetical protein | SK85_05008 | Not Available | Positive | 5155783 - 5156133 | 13431.8 |
| hypothetical protein | SK85_05009 | Not Available | Positive | 5156316 - 5156675 | 13781.6 |
| hypothetical protein | SK85_05010 | Not Available | Negative | 5156701 - 5157297 | 23651.2 |
| hypothetical protein | SK85_05011 | Not Available | Negative | 5157294 - 5157752 | 18065.5 |
| hypothetical protein | SK85_05012 | Not Available | Positive | 5157833 - 5158048 | 8616.66 |
| hypothetical protein | SK85_05013 | Not Available | Positive | 5159369 - 5160052 | 27322.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





