Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_04974 | Not Available | Positive | 5131934 - 5132476 | 20766.2 |
| hypothetical protein | SK85_04975 | Not Available | Positive | 5132473 - 5132727 | 10010.1 |
| hypothetical protein | SK85_04976 | Not Available | Positive | 5132724 - 5132960 | 8882.58 |
| hypothetical protein | SK85_04977 | Not Available | Positive | 5133523 - 5133828 | 11907.3 |
| hypothetical protein | SK85_04978 | Not Available | Positive | 5133908 - 5134045 | 5532.58 |
| hypothetical protein | SK85_04979 | Not Available | Negative | 5134495 - 5134821 | 11992.0 |
| hypothetical protein | SK85_04980 | Not Available | Positive | 5135050 - 5135382 | 12510.8 |
| hypothetical protein | SK85_04981 | Not Available | Positive | 5135412 - 5135759 | 12370.5 |
| hypothetical protein | SK85_04982 | Not Available | Positive | 5135771 - 5138371 | 98171.3 |
| hypothetical protein | SK85_04983 | Not Available | Positive | 5138368 - 5139189 | 31585.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





