Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 178296 - 179825 | Not Available |
| glutamate-1-semialdehyde 2,1-aminomutase | SK85_00154 | B1LGV7 | Negative | 178315 - 179595 | 45342.7 |
| h(+)/cl(-) exchange transporter clca | SK85_00155 | A7ZHP7 | Positive | 179820 - 181241 | 50351.9 |
| iron-sulfur cluster insertion protein erpa | SK85_00156 | A7ZHP8 | Positive | 181323 - 181667 | 12101.2 |
| inner membrane protein | SK85_00157 | P0AFP1 | Negative | 181714 - 182337 | 22101.1 |
| vitamin b12-binding protein | SK85_00158 | P37028 | Negative | 182375 - 183175 | 29368.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | SK85_00159 | A7ZHQ1 | Negative | 183168 - 183866 | 24355.4 |
| deoxyguanosinetriphosphate triphosphohydrolase | SK85_00160 | B7NIC3 | Positive | 183950 - 185467 | 59358.2 |
| periplasmic serine endoprotease degp | SK85_00161 | P0C0V1 | Positive | 185597 - 187021 | 49357.3 |
| carbohydrate diacid regulator | SK85_00162 | P37047 | Positive | 187176 - 188333 | 43690.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





