Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_04944 | Not Available | Negative | 5108506 - 5108835 | 11907.7 |
| hypothetical protein | SK85_04945 | Not Available | Negative | 5108894 - 5109382 | 19196.9 |
| hypothetical protein | SK85_04946 | Q00185 | Negative | 5109652 - 5111673 | 77468.5 |
| p-type dna transfer atpase virb11 | SK85_04947 | Q6FYW0 | Negative | 5111995 - 5113008 | 37833.5 |
| hypothetical protein | SK85_04948 | Q8YDZ0 | Negative | 5113008 - 5114219 | 43721.1 |
| p-type conjugative transfer protein virb9 | SK85_04949 | Not Available | Negative | 5114209 - 5115006 | 29496.7 |
| hypothetical protein | SK85_04950 | Q7WDT8 | Negative | 5115003 - 5115749 | 28258.9 |
| hypothetical protein | SK85_04951 | Not Available | Negative | 5115749 - 5115892 | 5190.36 |
| hypothetical protein | SK85_04952 | Not Available | Negative | 5115943 - 5116992 | 37918.6 |
| hypothetical protein | SK85_04953 | Not Available | Negative | 5117060 - 5117407 | 13176.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





